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vi /sw/R/2.13.0/lib64/R/bin/R R_HOME_DIR=/sw/R/2.13.0/lib64/R #R_HOME_DIR=/usr/local/src/apps/R-2.13.0/lib64/R |
Additional packages
You may need to add this in ~/.R/Makevars to compile some of the packages successfully.
CXX14 = g++ -std=c++1y -Wno-unused-variable -Wno-unused-function -fPIC
mvtnorm
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> install.packages("mvtnorm", repos="http://R-Forge.R-project.org")
trying URL 'http://R-Forge.R-project.org/src/contrib/mvtnorm_0.9-9992.tar.gz'
Content type 'application/x-gzip' length 315853 bytes (308 Kb)
opened URL
==================================================
downloaded 308 Kb
* installing *source* package âmvtnormâ ...
** libs
gcc -std=gnu99 -I/sw/R/2.13.0/lib64/R/include -I/usr/local/include -fpic -g -O2 -c miwa.c -o miwa.o
gfortran -fpic -g -O2 -c mvt.f -o mvt.o
gcc -std=gnu99 -I/sw/R/2.13.0/lib64/R/include -I/usr/local/include -fpic -g -O2 -c randomF77.c -o randomF77.o
gfortran -fpic -g -O2 -c tvpack.f -o tvpack.o
gcc -std=gnu99 -I/sw/R/2.13.0/lib64/R/include -I/usr/local/include -fpic -g -O2 -c tvpackAux.c -o tvpackAux.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o mvtnorm.so miwa.o mvt.o randomF77.o tvpack.o tvpackAux.o -lgfortran -lm -L/sw/R/2.13.0/lib64/R/lib -lR
installing to /sw/R/2.13.0/lib64/R/library/mvtnorm/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (mvtnorm)
The downloaded packages are in
â/tmp/RtmpVkCqG5/downloaded_packagesâ
Updating HTML index of packages in '.Library'
Making packages.html ... done
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