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Introduction
OpenSim is software that lets users develop models of musculoskeletal structures and create dynamic simulations of movement
Usage
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module load misc/opensim/3.2.0 |
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module load cmake/3.5.0 module load library/lapackBlas/3.6.0 module load gcc/4.9.3 module load misc/simbody/3.5.4 download and copy the models first to: /sw/misc/opensim/3.2.0/src/opensim-core-3.2.0 cd /sw/misc/opensim/3.2.0/src/opensim-core-3.2.0/opensim-models-master cmake . -DCMAKE_C_COMPILER=/sw/gcc/4.9.3/bin/gcc -DCMAKE_CXX_COMPILER=/sw/gcc/4.9.3/bin/g++ -DCMAKE_INSTALL_PREFIX=/sw/misc/opensim/3.2.0/Models 2>&1 | tee cmakeLog2.txt Next if CFSQ file source is not available in /sw/misc/opensim/3.2.0/src/opensim-core-3.2.0/Vendors, edit the CMakeLists.txt and edit out reference to CFSQ. (Not sure about the implication of this but would love to get feedback) ##SUBDIRS(CFSQP lepton) SUBDIRS(lepton) cd /sw/misc/opensim/3.2.0/src/opensim-core-3.2.0 cmake . -DCMAKE_C_COMPILER=/sw/gcc/4.9.3/bin/gcc -DCMAKE_CXX_COMPILER=/sw/gcc/4.9.3/bin/g++ -DCMAKE_INSTALL_PREFIX=/sw/misc/opensim/3.2.0 -DSimbody_INCLUDE_DIR=/sw/misc/simbody/3.5.4/include 2>&1 | tee cmakeLog1.txt make 2>&1 | tee makeLog.txt make install 2>&1 | tee makeInstallLog.txt |
Citation
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PLEASE
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CITE
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THESE
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PAPERS
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Delp
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SL,
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Anderson
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FC,
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Arnold
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AS,
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Loan
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P,
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Habib
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A,
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John
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CT,
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Guendelman
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E,
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Thelen
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DG.
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OpenSim:
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Open-source
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Software
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to
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Create
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and
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Analyze
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Dynamic
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Simulations
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of
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Movement.
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IEEE
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Transactions
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on
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Biomedical
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Engineering.
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(2007)
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