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Introduction
OpenSim is software that lets users develop models of musculoskeletal structures and create dynamic simulations of movement
Usage
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module load misc/opensim/3.2.0 module load misc/opensim/3.2.0py |
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module load cmake/3.5.0 module load library/lapackBlas/3.6.0 module load gcc/4.9.3 module load misc/simbody/3.5.4 module load python/2.7.10 module load library/swig/2.0.12 mkidrmkdir -p /sw/misc/opensim/3.2.0py/src cd /sw/misc/opensim/3.2.0py/src tar -zxvf /sw/misc/opensim/3.2.0/src/v3.2.0.tar.gz cd /sw/misc/opensim/3.2.0py/src/opensim-core-3.2.0 vi Vendors/CMakeLists.txt unzip /tmp/opensim-models-master.zip mv opensim-models-master Models cmake . -DCMAKE_C_COMPILER=/sw/gcc/4.9.3/bin/gcc -DCMAKE_CXX_COMPILER=/sw/gcc/4.9.3/bin/g++ -DCMAKE_INSTALL_PREFIX=/sw/misc/opensim/3.2.0py 2>&1 | tee cmakeLog.txt Then the easiest way to do it is to use ccmake as below: >>>>>>>>>>>>>>> cd cd /sw/misc/opensim/3.2.0py/src/opensim-core-3.2.0 ccmake . Press [t] to toggle advanced mode Change BUILD_PYTHON_WRAPPING ON Press [c] to configure There may be errors that needs to be fixed. >>>>Errors>>>>>>> PYTHON_EXECUTABLE */usr/bin/python2.6 PYTHON_INCLUDE_DIR */usr/include/python2.6 PYTHON_LIBRARY */usr/lib64/libpython2.6.so PYTHON_LIBRARY_DEBUG *PYTHON_LIBRARY_DEBUG-NOTFOUND SWIG_DIR */usr/share/swig/1.3.40 SWIG_EXECUTABLE */usr/bin/swig SWIG_VERSION *1.3.40 >>>>>Change it to look like this>>>>> PYTHON_EXECUTABLE */sw/python/2.7.10/bin/python PYTHON_INCLUDE_DIR */sw/python/2.7.10/include/python2.7 PYTHON_LIBRARY */sw/python/2.7.10/lib/libpython2.7.so PYTHON_LIBRARY_DEBUG *PYTHON_LIBRARY_DEBUG-NOTFOUND SWIG_DIR */sw/library/swig/2.0.12 SWIG_EXECUTABLE */sw/library/swig/2.0.12/bin/swig SWIG_VERSION *2.0.12 >>>>>> Press [g] to generate and exit make 2>&1 | tee makeLog.txt make install 2>&1 | tee makeInstallLog.txt |
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