...
Anaconda is a completely free Python distribution (including for commercial use and redistribution). It includes over 195 of the most popular Python packages for science, math, engineering, data analysis.
Usage
| No Format |
|---|
The usage is:
module load anaconda/4.00py2.7
OR:
module load anaconda/4.00py3.5
Manual Usage:
You will need to activate the environment. For example, to activate biopython
source activate biopython
discarding /sw/anaconda/2.0.1/bin from PATH
prepending /sw/anaconda/2.0.1/envs/biopython/bin to PATH
To deactivate this environment, use:
source deactivate
Module Usage:
=============
For example,You can use this to load biopython using python 2.7 version (anaconda) :
module load anaconda/py27biopython1.66
For python 3.5 (anaconda env), use this:
module load anaconda/py35biopython1.66
Anaconda environment need not be loaded separately.
However, it can be loaded as follows if needed for other reasons:
module load anaconda/4.00py2.7
module load anaconda/4.00py3.5
|
...
| No Format |
|---|
conda create -n biopython biopython
Fetching package metadata: ..
Solving package specifications: .
Package plan for installation in environment /sw/anaconda/2.0.1/envs/biopython:
The following packages will be downloaded:
package | build
---------------------------|-----------------
biopython-1.64 | np18py27_0 2.1 MB
python-2.7.8 | 0 11.3 MB
------------------------------------------------------------
Total: 13.5 MB
The following packages will be linked:
package | build
---------------------------|-----------------
biopython-1.64 | np18py27_0 hard-link
numpy-1.8.1 | py27_0 hard-link
openssl-1.0.1h | 0 hard-link
python-2.7.8 | 0 hard-link
readline-6.2 | 2 hard-link
sqlite-3.8.4.1 | 0 hard-link
system-5.8 | 1 hard-link
tk-8.5.15 | 0 hard-link
zlib-1.2.7 | 0 hard-link
Proceed ([y]/n)? y
Fetching packages ...
biopython-1.64 100% |##########################| Time: 0:00:15 144.95 kB/s
python-2.7.8-0 100% |##########################| Time: 0:00:14 821.86 kB/s
Extracting packages ...
[ COMPLETE ] |#######################| 100%
Linking packages ...
[ COMPLETE ] |#######################| 100%
#
# To activate this environment, use:
# $ source activate biopython
#
# To deactivate this environment, use:
# $ source deactivate
#
|
Installed Environment
| No Format |
|---|
pytorch |
Activate an environment
| No Format |
|---|
source activate biopython e.g: source activate biopython discarding /sw/anaconda/2.0.1/bin from PATH prepending /sw/anaconda/2.0.1/envs/biopython/bin to PATH |
...