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...

No Format
module load caffe/caffe

 

Installation

No Format
Installation errors out...Not complete

module         load cmake/3.5.0
module         load octave/3.8.0
module         load boost/1.60.0
module         load opencv/3.1.0
module         load library/hdf5/1.8.7
#module         load cuda/7.5.18
module         load caffe/gflags/gflags
module         load caffe/glog/0.3.3
module         load caffe/leveldb/leveldb
module         load caffe/lmdb/lmdb
module         load caffe/protobuf/protobuf
module         load caffe/snappy/snappy
module         load python/2.7.1-shared
module         load library/atlas/3.10.2
module         load matlab/2015b

cd /sw/caffe
unzip caffe-master.zip
cd /sw/caffe/caffe-master
mkdir build




...

No Format
vi /sw/caffe/caffe-master/CMakeLists.txt
Add the following at the bottom
>>>>>>
#target_link_libraries(filters ${OpenCV_LIBRARIES})
FIND_PACKAGE(OpenCV REQUIRED)
FIND_PACKAGE(Protobuf REQUIRED)
FIND_PACKAGE(Matlab REQUIRED)
>>>>>>>>
Also edit: vi /sw/caffe/caffe-master/src/caffe/CMakeLists.txt
Added ${OpenCV_LIBRARIES} as in:
target_link_libraries(caffe proto ${Caffe_LINKER_LIBS} ${OpenCV_LIBRARIES})
>>>>>>

 

 

...

Install libmpc-devel package

No Format
cd /sw/caffe/caffe-master/build
cmake -D CMAKE_INSTALL_PREFIX=/sw/caffe/caffe-master -DBUILD_SHARED_LIBS=ON -DAtlas_LAPACK_LIBRARY=/sw/library/atlas/3.10.2/lib/liblapack.so -DBUILD_matlab=ON -DMATLAB_DIR=/sw/Matlab/R2015b -DMatlab_mexext=/sw/Matlab/R2015b/toolbox/matlab/general -DMatlab_mex=/sw/Matlab/R2015b/toolbox/matlab/general -DOpenCV_DIR=/sw/opencv/opencv-3.1.0 -DOctave_DIR=/sw/octave/3.8.0  -DCUDNN_INCLUDE="/sw/cuda/cuda_7.5.18/include" -DCUDNN_LIBRARY="/sw/cuda/cuda_7.5.18/lib64/libcudnn.so" -DPROTOBUF_LIBRARY=/sw/caffe/protobuf/lib/libprotobuf.so  .. 2>&1 | tee cmakelog.txt

make
make install
No Format
>>>>>>>>>
cmake -D CMAKE_INSTALL_PREFIX=/sw/caffe/caffe-master -DBUILD_SHARED_LIBS=ON -DAtlas_LAPACK_LIBRARY=/sw/library/atlas/3.10.2/lib/liblapack.sorpm -ivh /tmp/libmpc-devel-0.8-3.el6.x86_64.rpm  /tmp/libmpc-0.8-3.el6.x86_64.rpm
Preparing...                ########################################### [100%]
   1:libmpc                 ########################################### [ 50%]
   2:libmpc-devel           ########################################### [100%]

 

Actual Compilation

 

No Format
cd /sw/caffe/caffe-master/build



cmake -D CMAKE_INSTALL_PREFIX=/sw/caffe/caffe -DBUILD_SHARED_LIBS=ON  -DBUILD_matlab=ON -DMATLAB_DIR=/sw/Matlab/R2015b -DMatlab_mexext=/sw/Matlab/R2015b/toolboxbin/matlab/generalmex -DMatlab_mex=/sw/Matlab/R2015b/toolbox/matlab/generalbin/mex  -DOpenCVDMatlab_DIR=/sw/opencv/opencv-3.1.0Matlab/R2015b -DOctave_DIR=/sw/octave/3.8.0  -DCUDNN_INCLUDE="/sw/cuda/cuda_7.5.18/include" -DCUDNN_LIBRARY="/sw/cuda/cuda_7.5.18/lib64/libcudnn.so" -DPROTOBUFDAtlas_LAPACK_LIBRARY=/sw/caffelibrary/protobuf/lib/libprotobuf.so lapack/lapack-3.6.0/3.6.0/lib64/liblapack.so -lopencv_imgcodecs .. 2>&1 | tee cmakelog.txt
--
Boost
versionPS: 1.60.0
-- Found the following Boost libraries:
--   system
--   thread
--   filesystem
--   chrono
--   date_time
--   atomic
-- Found gflags  (include: /sw/caffe/gflags/usr/local/include, library: /sw/caffe/gflags/usr/local/lib/libgflags.a)
-- Found glog    (include: /sw/caffe/glog/0.3.3/include, library: /sw/caffe/glog/0.3.3/lib/libglog.so)
-- Found PROTOBUF Compiler: /sw/caffe/protobuf/bin/protoc
-- Found lmdb    (include: /sw/caffe/lmdb/usr/local/include, library: /sw/caffe/lmdb/usr/local/lib/liblmdb.so)
-- Found LevelDB (include: /sw/caffe/leveldb/include, library: /sw/caffe/leveldb/lib/libleveldb.so)
-- Found Snappy  (include: /sw/caffe/snappy/include, library: /sw/caffe/snappy/lib/libsnappy.so)
-- CUDA detected: 7.5
-- Found cuDNN: ver. 4.0.7 found (include: Please NOTE that It needs version 4.4X of gcc to compile the first part due to the version of boost, cuda etc on this cluster

make >2&1 | tee makelog.txt

You will get an error at nearly 100% . It is due to matlab2015a stuff needing gcc compiler version 4.7X. 
At this point onlym just do this: module load compilers/gcc-4.7.1
make 2>&1 | tee makelog2.txt
make install 2>&1 | tee makeInstalllog.txt

No Format
>>>>>>>>>
cmake -D CMAKE_INSTALL_PREFIX=/sw/caffe/caffe -DBUILD_SHARED_LIBS=ON  -DBUILD_matlab=ON -DMATLAB_DIR=/sw/Matlab/R2015b -DMatlab_mexext=/sw/Matlab/R2015b/bin/mex -DMatlab_mex=/sw/Matlab/R2015b/bin/mex  -DMatlab_DIR=/sw/Matlab/R2015b -DOctave_DIR=/sw/octave/3.8.0 -DCUDNN_INCLUDE="/sw/cuda/cuda_7.5.18/include, library: " -DCUDNN_LIBRARY="/sw/cuda/cuda_7.5.18/lib64/libcudnn.so)" -DAtlas_LAPACK_LIBRARY=/sw/library/lapack/lapack- Added CUDA NVCC flags for: sm_20
-- OpenCV found (/sw/opencv/opencv-3.1.0/cmake)
-- Found Atlas: /sw/library/atlas/3.10.2/include
-- Found Atlas (include: /sw/library/atlas/3.10.2/include, library: /sw/library/atlas/3.10.2/lib/libatlas.so)
-- NumPy ver. 1.12.0.dev0+1380fdd found (include: /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include)
-- Boost version: 1.60.0
-- Found the following Boost libraries:
--   python
dirname: missing operand
Try `dirname --help' for more information.
dirname: missing operand
Try `dirname --help' for more information.
-- Detected Doxygen OUTPUT_DIRECTORY: ./doxygen/
--
-- ******************* Caffe Configuration Summary *******************
-- General:
--   Version           :   1.0.0-rc3
--   Git               :   unknown
--   System            :   Linux
--   C++ compiler      :   /usr/bin/c++
--   Release CXX flags :   -O3 -DNDEBUG -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Debug CXX flags   :   -g -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Build type        :   Release
--
--   BUILD_SHARED_LIBS :   ON
--   BUILD_python      :   ON
--   BUILD_matlab      :   ON
--   BUILD_docs        :   ON
--   CPU_ONLY          :   OFF
--   USE_OPENCV        :   ON
--   USE_LEVELDB       :   ON
--   USE_LMDB          :   ON
--   ALLOW_LMDB_NOLOCK :   OFF
--
-- Dependencies:
--   BLAS              :   Yes (Atlas)
--   Boost             :   Yes (ver. 1.60)
--   glog              :   Yes
--   gflags            :   Yes
--   protobuf          :   Yes (ver. 3.0.0)
--   lmdb              :   Yes (ver. 0.9.70)
--   LevelDB           :   Yes (ver. 1.18)
--   Snappy            :   Yes (ver. 1.1.3)
--   OpenCV            :   Yes (ver. 3.1.0)
--   CUDA              :   Yes (ver. 7.5)
--
-- NVIDIA CUDA:
--   Target GPU(s)     :   Auto
--   GPU arch(s)       :   sm_20
--   cuDNN  3.6.0/3.6.0/lib64/liblapack.so -lopencv_imgcodecs .. 2>&1 | tee cmakelog.txt
-- The C compiler identification is GNU 4.4.7
-- The CXX compiler identification is GNU 4.4.7
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Boost version: 1.60.0
-- Found the following Boost libraries:
--   system
--   thread
--   filesystem
--   chrono
--   date_time
--   atomic
-- Found GFlags: /sw/caffe/gflags/usr/local/include
-- Found gflags  (include: /sw/caffe/gflags/usr/local/include, library: /sw/caffe/gflags/usr/local/lib/libgflags.a)
-- Found Glog: /sw/caffe/glog/0.3.3/include
-- Found glog    (include: /sw/caffe/glog/0.3.3/include, library: /sw/caffe/glog/0.3.3/lib/libglog.so)
-- Found PROTOBUF: /sw/caffe/protobuf/lib/libprotobuf.so
-- Found PROTOBUF Compiler: /sw/caffe/protobuf/bin/protoc
-- Found HDF5: /sw/library/hdf5/1.8.7/lib/libhdf5_hl.so;/sw/library/hdf5/1.8.7/lib/libhdf5.so;/usr/lib64/libz.so;/usr/lib64/libm.so (found version "1.8.7")
-- Found LMDB: /sw/caffe/lmdb/usr/local/include
-- Found lmdb    (include: /sw/caffe/lmdb/usr/local/include, library: /sw/caffe/lmdb/usr/local/lib/liblmdb.so)
-- Found LevelDB: /sw/caffe/leveldb/include
-- Found LevelDB (include: /sw/caffe/leveldb/include, library: /sw/caffe/leveldb/lib/libleveldb.so)
-- Found Snappy: /sw/caffe/snappy/include
-- Found Snappy  (include: /sw/caffe/snappy/include, library: /sw/caffe/snappy/lib/libsnappy.so)
-- CUDA detected: 7.5
-- Found cuDNN: ver. 4.0.7 found (include: /sw/cuda/cuda_7.5.18/include, library: /sw/cuda/cuda_7.5.18/lib64/libcudnn.so)
-- Added CUDA NVCC flags for: sm_20
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.23")
-- Checking for module 'opencv'
--   Found opencv, version 3.1.0
-- Checking for module 'opencv'
--   Found opencv, version 3.1.0
-- LIBS3.1.0
-- OpenCV found ()
-- Found Atlas: /sw/library/atlas/3.10.2/include
-- Found Atlas (include: /sw/library/atlas/3.10.2/include, library: /sw/library/atlas/3.10.2/lib/libatlas.so)
-- Found PythonInterp: /sw/python/2.7.1-shared/bin/python2.7 (found suitable version "2.7.1", minimum required is "2.7")
-- Found PythonLibs: /sw/python/2.7.1-shared/lib/libpython2.7.so (found suitable version "2.7.1", minimum required is "2.7")
-- Found NumPy: /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include (found suitable version "1.12.0.dev0+1380fdd", minimum required is "1.7.1")
-- NumPy ver. 1.12.0.dev0+1380fdd found (include: /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include)
-- Boost version: 1.60.0
-- Found the following Boost libraries:
--   python
dirname: missing operand
Try `dirname --help' for more information.
dirname: missing operand
Try `dirname --help' for more information.
-- Found MatlabMex: /sw/Matlab/R2015b/bin/mex
-- Found Doxygen: /usr/bin/doxygen (found version "1.6.1")
Not enough input arguments.
-- Detected Doxygen OUTPUT_DIRECTORY: ./doxygen/
-- Found Git: /usr/bin/git (found version "1.7.1")
--
-- ******************* Caffe Configuration Summary *******************
-- General:
--   Version           :   Yes (ver. 4.0.7)
--
-- Python:
1.0.0-rc3
--   Git               :   unknown
--   InterpreterSystem          :   /sw/python/2.7.1-shared/bin/python2.7 (ver. 2.7.1):   Linux
--   LibrariesC++ compiler        :   /swusr/python/2.7.1-shared/lib/libpython2.7.so (ver 2.7.1)
--   NumPy          bin/c++
--   Release CXX flags :   -O3 -DNDEBUG -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Debug CXX flags   :   /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include (ver 1.12.0.dev0+1380fdd)
--
-- Matlab:
--   Matlab -g -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Build type           :   Yes (/sw/Matlab/R2015b/toolbox/matlab/general, /sw/Matlab/R2015b/toolbox/matlab/general
Release
--
--   OctaveBUILD_SHARED_LIBS :   ON
--   BUILD_python      :   Yes (/sw/octave/3.8.0/bin/mkoctfile)
ON
--   BuildBUILD_matlab mex using    :   MatlabON
--
-- Documentaion:
   BUILD_docs        :   ON
--   DoxygenCPU_ONLY           :   /usr/bin/doxygen (1.6.1)
OFF
--   configUSE_fileOPENCV        :   /sw/caffe/caffe-master/.DoxyfileON
--
-- Install:   USE_LEVELDB       :   ON
--   USE_LMDB   Install path      :   /sw/caffe/caffe-masterON
--
-- Configuring done   ALLOW_LMDB_NOLOCK :   OFF
--
Generating-- doneDependencies:
-- Build files haveBLAS been written to: /sw/caffe/caffe-master/build  >>>>>>>>> 
No Format
make [  0%] Running C++/Python protocol buffer: compiler on /sw/caffe/caffe-master/src/caffe/proto/caffe.proto
Scanning dependencies of target proto
[  1%] Building CXX object src/caffe/CMakeFiles/proto.dir/__/__/include/caffe/proto/caffe.pb.cc.o
[  1%] Linking CXX static library ../../lib/libproto.a
[  1%] Built target proto
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/util/cuda_compile_generated_math_functions.cu.o
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_absval_layer.cu.o
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_base_data_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_batch_norm_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_batch_reindex_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_bias_layer.cu.o
[  4%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_bnll_layer.cu.o
[  4%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_concat_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_contrastive_loss_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_conv_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_crop_layer.cu.o
[  6%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_conv_layer.cu.o
[  6%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_lcn_layer.cu.o
[  6%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_lrn_layer.cu.o
[  8%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_pooling_layer.cu.o
[  8%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_relu_layer.cu.o

snip <<< CLIP

[ 79%] Building CXX object src/caffe/CMakeFiles/caffe.dir/util/upgrade_proto.cpp.o
[ 80%] Linking CXX shared library ../../lib/libcaffe.so
[ 80%] Built target caffe
Scanning dependencies of target convert_imageset
[ 80%] Building CXX object tools/CMakeFiles/convert_imageset.dir/convert_imageset.cpp.o
[ 80%] Linking CXX executable convert_imageset
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::Mat::Mat(cv::Mat const&, cv::Rect_<int> const&)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::Mat::copySize(cv::Mat const&)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::imread(cv::String const&, int)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::String::allocate(unsigned long)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::String::deallocate()'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::imencode(cv::String const&, cv::_InputArray const&, std::vector<unsigned char, std::allocator<unsigned char> >&, std::vector<int, std::allocator<int> > const&)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::Mat::deallocate()'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::imdecode(cv::_InputArray const&, int)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::fastFree(void*)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::resize(cv::_InputArray const&, cv::_OutputArray const&, cv::Size_<int>, double, double, int)'
../lib/libcaffe.so.1.0.0-rc3: undefined reference to `cv::flip(cv::_InputArray const&, cv::_OutputArray const&, int)'
collect2: ld returned 1 exit status
make[2]: *** [tools/convert_imageset] Error 1
make[1]: *** [tools/CMakeFiles/convert_imageset.dir/all] Error 2
make: *** [all] Error 2

  Yes (Atlas)
--   Boost             :   Yes (ver. 1.60)
--   glog              :   Yes
--   gflags            :   Yes
--   protobuf          :   Yes (ver. 3.0.0)
--   lmdb              :   Yes (ver. 0.9.70)
--   LevelDB           :   Yes (ver. 1.18)
--   Snappy            :   Yes (ver. 1.1.3)
--   OpenCV            :   Yes (ver. 3.1.0)
--   CUDA              :   Yes (ver. 7.5)
--
-- NVIDIA CUDA:
--   Target GPU(s)     :   Auto
--   GPU arch(s)       :   sm_20
--   cuDNN             :   Yes (ver. 4.0.7)
--
-- Python:
--   Interpreter       :   /sw/python/2.7.1-shared/bin/python2.7 (ver. 2.7.1)
--   Libraries         :   /sw/python/2.7.1-shared/lib/libpython2.7.so (ver 2.7.1)
--   NumPy             :   /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include (ver 1.12.0.dev0+1380fdd)
--
-- Matlab:
--   Matlab            :   Yes (/sw/Matlab/R2015b/bin/mex, /sw/Matlab/R2015b/bin/mex
--   Octave            :   Yes (/sw/octave/3.8.0/bin/mkoctfile)
--   Build mex using   :   Matlab
--
-- Documentaion:
--   Doxygen           :   /usr/bin/doxygen (1.6.1)
--   config_file       :   /sw/caffe/caffe-master/.Doxyfile
--
-- Install:
--   Install path      :   /sw/caffe/caffe
--
-- LIBS3.1.0
-- Found Matlab: /sw/Matlab/R2015b/extern/include (found version "8.6")
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    MATLAB_DIR
    Octave_DIR


-- Build files have been written to: /sw/caffe/caffe-master/build

>>>>>>>>> 
No Format
First attempt:

make
make 2>&1 | tee makelog.txt
[  0%] Running C++/Python protocol buffer compiler on /sw/caffe/caffe-master/src/caffe/proto/caffe.proto
Scanning dependencies of target proto
[  1%] Building CXX object src/caffe/CMakeFiles/proto.dir/__/__/include/caffe/proto/caffe.pb.cc.o
[  1%] Linking CXX static library ../../lib/libproto.a
[  1%] Built target proto
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/util/cuda_compile_generated_math_functions.cu.o
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_absval_layer.cu.o
[  1%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_base_data_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_batch_norm_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_batch_reindex_layer.cu.o
[  2%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_bias_layer.cu.o
[  4%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_bnll_layer.cu.o
[  4%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_concat_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_contrastive_loss_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_conv_layer.cu.o
[  5%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_crop_layer.cu.o
[  6%] Building NVCC (Device) object src/caffe/CMakeFiles/cuda_compile.dir/layers/cuda_compile_generated_cudnn_conv_layer.cu.o

snip <<< CLIP
[ 97%] Building CXX object examples/CMakeFiles/convert_cifar_data.dir/cifar10/convert_cifar_data.cpp.o
[ 98%] Linking CXX executable cifar10/convert_cifar_data
[ 98%] Built target convert_cifar_data
Scanning dependencies of target pycaffe
[ 98%] Building CXX object python/CMakeFiles/pycaffe.dir/caffe/_caffe.cpp.o
In file included from /sw/library/boost/1.60.0/ser/include/boost/type_traits/ice.hpp:15,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/detail/def_helper.hpp:9,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/class.hpp:29,
                 from /sw/library/boost/1.60.0/ser/include/boost/python.hpp:18,
                 from /sw/caffe/caffe-master/python/caffe/_caffe.cpp:7:
/sw/library/boost/1.60.0/ser/include/boost/type_traits/detail/ice_or.hpp:17: note: #pragma message: NOTE: Use of this header (ice_or.hpp) is deprecated
In file included from /sw/library/boost/1.60.0/ser/include/boost/type_traits/ice.hpp:16,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/detail/def_helper.hpp:9,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/class.hpp:29,
                 from /sw/library/boost/1.60.0/ser/include/boost/python.hpp:18,
                 from /sw/caffe/caffe-master/python/caffe/_caffe.cpp:7:
/sw/library/boost/1.60.0/ser/include/boost/type_traits/detail/ice_and.hpp:18: note: #pragma message: NOTE: Use of this header (ice_and.hpp) is deprecated
In file included from /sw/library/boost/1.60.0/ser/include/boost/type_traits/ice.hpp:17,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/detail/def_helper.hpp:9,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/class.hpp:29,
                 from /sw/library/boost/1.60.0/ser/include/boost/python.hpp:18,
                 from /sw/caffe/caffe-master/python/caffe/_caffe.cpp:7:
/sw/library/boost/1.60.0/ser/include/boost/type_traits/detail/ice_not.hpp:17: note: #pragma message: NOTE: Use of this header (ice_not.hpp) is deprecated
In file included from /sw/library/boost/1.60.0/ser/include/boost/type_traits/ice.hpp:18,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/detail/def_helper.hpp:9,
                 from /sw/library/boost/1.60.0/ser/include/boost/python/class.hpp:29,
                 from /sw/library/boost/1.60.0/ser/include/boost/python.hpp:18,
                 from /sw/caffe/caffe-master/python/caffe/_caffe.cpp:7:
/sw/library/boost/1.60.0/ser/include/boost/type_traits/detail/ice_eq.hpp:17: note: #pragma message: NOTE: Use of this header (ice_eq.hpp) is deprecated
[100%] Linking CXX shared library ../lib/_caffe.so
Creating symlink /sw/caffe/caffe-master/python/caffe/_caffe.so -> /sw/caffe/caffe-master/build/lib/_caffe.so
[100%] Built target pycaffe
Scanning dependencies of target matlab
[100%] Building Matlab interface: /sw/caffe/caffe-master/matlab/+caffe/private/caffe_.mex
Building with 'g++'.
cc1plus: error: unrecognized command line option "-std=c++11"

make[2]: *** [../matlab/+caffe/private/caffe_.mex] Error 255
make[1]: *** [matlab/CMakeFiles/matlab.dir/all] Error 2
make: *** [all] Error 2


>>>>>>>>
module load compilers/gcc-4.7.1
make 2>&1 | tee makelog2.txt
-- Boost version: 1.60.0
-- Found the following Boost libraries:
--   system
--   thread
--   filesystem
--   chrono
--   date_time
--   atomic
-- Found gflags  (include: /sw/caffe/gflags/usr/local/include, library: /sw/caffe/gflags/usr/local/lib/libgflags.a)
-- Found glog    (include: /sw/caffe/glog/0.3.3/include, library: /sw/caffe/glog/0.3.3/lib/libglog.so)
-- Found PROTOBUF Compiler: /sw/caffe/protobuf/bin/protoc
-- Found lmdb    (include: /sw/caffe/lmdb/usr/local/include, library: /sw/caffe/lmdb/usr/local/lib/liblmdb.so)
-- Found LevelDB (include: /sw/caffe/leveldb/include, library: /sw/caffe/leveldb/lib/libleveldb.so)
-- Found Snappy  (include: /sw/caffe/snappy/include, library: /sw/caffe/snappy/lib/libsnappy.so)
-- CUDA detected: 7.5
-- Found cuDNN: ver. 4.0.7 found (include: /sw/cuda/cuda_7.5.18/include, library: /sw/cuda/cuda_7.5.18/lib64/libcudnn.so)
-- Added CUDA NVCC flags for: sm_20
-- LIBS3.1.0
-- OpenCV found ()
-- Found Atlas (include: /sw/library/atlas/3.10.2/include, library: /sw/library/atlas/3.10.2/lib/libatlas.so)
-- NumPy ver. 1.12.0.dev0+1380fdd found (include: /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include)
-- Boost version: 1.60.0
-- Found the following Boost libraries:
--   python
dirname: missing operand
Try `dirname --help' for more information.
dirname: missing operand
Try `dirname --help' for more information.
Not enough input arguments.
-- Detected Doxygen OUTPUT_DIRECTORY: ./doxygen/
--
-- ******************* Caffe Configuration Summary *******************
-- General:
--   Version           :   1.0.0-rc3
--   Git               :   unknown
--   System            :   Linux
--   C++ compiler      :   /usr/bin/c++
--   Release CXX flags :   -O3 -DNDEBUG -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Debug CXX flags   :   -g -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Build type        :   Release
--
--   BUILD_SHARED_LIBS :   ON
--   BUILD_python      :   ON
--   BUILD_matlab      :   ON
--   BUILD_docs        :   ON
--   CPU_ONLY          :   OFF
--   USE_OPENCV        :   ON
--   USE_LEVELDB       :   ON
--   USE_LMDB          :   ON
--   ALLOW_LMDB_NOLOCK :   OFF
--
-- Dependencies:
--   BLAS              :   Yes (Atlas)
--   Boost             :   Yes (ver. 1.60)
--   glog              :   Yes
--   gflags            :   Yes
--   protobuf          :   Yes (ver. 3.0.0)
--   lmdb              :   Yes (ver. 0.9.70)
--   LevelDB           :   Yes (ver. 1.18)
--   Snappy            :   Yes (ver. 1.1.3)
--   OpenCV            :   Yes (ver. 3.1.0)
--   CUDA              :   Yes (ver. 7.5)
--
-- NVIDIA CUDA:
--   Target GPU(s)     :   Auto
--   GPU arch(s)       :   sm_20
--   cuDNN             :   Yes (ver. 4.0.7)
--
-- Python:
--   Interpreter       :   /sw/python/2.7.1-shared/bin/python2.7 (ver. 2.7.1)
--   Libraries         :   /sw/python/2.7.1-shared/lib/libpython2.7.so (ver 2.7.1)
--   NumPy             :   /sw/python/2.7.1-shared/lib/python2.7/site-packages/numpy-1.12.0.dev0+1380fdd-py2.7-linux-x86_64.egg/numpy/core/include (ver 1.12.0.dev0+1380fdd)
--
-- Matlab:
--   Matlab            :   Yes (/sw/Matlab/R2015b/bin/mex, /sw/Matlab/R2015b/bin/mex
--   Octave            :   Yes (/sw/octave/3.8.0/bin/mkoctfile)
--   Build mex using   :   Matlab
--
-- Documentaion:
--   Doxygen           :   /usr/bin/doxygen (1.6.1)
--   config_file       :   /sw/caffe/caffe-master/.Doxyfile
--
-- Install:
--   Install path      :   /sw/caffe/caffe
--
-- LIBS3.1.0
-- Configuring done
-- Generating done
-- Build files have been written to: /sw/caffe/caffe-master/build
[  1%] Built target proto
Scanning dependencies of target caffe
[  2%] Linking CXX shared library ../../lib/libcaffe.so
[ 80%] Built target caffe
[ 82%] Linking CXX executable device_query
[ 82%] Built target device_query
[ 82%] Linking CXX executable compute_image_mean
[ 83%] Built target compute_image_mean
[ 83%] Linking CXX executable extract_features
[ 84%] Built target extract_features
[ 86%] Linking CXX executable upgrade_net_proto_text
[ 86%] Built target upgrade_net_proto_text
[ 87%] Linking CXX executable finetune_net
[ 87%] Built target finetune_net
[ 89%] Linking CXX executable caffe
[ 89%] Built target caffe.bin
[ 90%] Linking CXX executable upgrade_solver_proto_text
[ 90%] Built target upgrade_solver_proto_text
[ 90%] Linking CXX executable test_net
[ 90%] Built target test_net
[ 90%] Linking CXX executable net_speed_benchmark
[ 91%] Built target net_speed_benchmark
[ 91%] Linking CXX executable upgrade_net_proto_binary
[ 93%] Built target upgrade_net_proto_binary
[ 94%] Linking CXX executable convert_imageset
[ 94%] Built target convert_imageset
[ 94%] Linking CXX executable train_net
[ 95%] Built target train_net
[ 95%] Linking CXX executable mnist/convert_mnist_data
[ 95%] Built target convert_mnist_data
[ 95%] Linking CXX executable siamese/convert_mnist_siamese_data
[ 97%] Built target convert_mnist_siamese_data
[ 97%] Linking CXX executable cpp_classification/classification
[ 97%] Built target classification
[ 98%] Linking CXX executable cifar10/convert_cifar_data
[ 98%] Built target convert_cifar_data
[100%] Linking CXX shared library ../lib/_caffe.so
Creating symlink /sw/caffe/caffe-master/python/caffe/_caffe.so -> /sw/caffe/caffe-master/build/lib/_caffe.so
[100%] Built target pycaffe
[100%] Building Matlab interface: /sw/caffe/caffe-master/matlab/+caffe/private/caffe_.mex
Building with 'g++'.
MEX completed successfully.
[100%] Built target matlab

SUCCESS!!!!!! 
No Format
make install 2>&1 | tee makeInstalllog.txt
[  1%] Built target proto
[ 80%] Built target caffe
[ 82%] Built target device_query
[ 83%] Built target compute_image_mean
[ 84%] Built target extract_features
[ 86%] Built target upgrade_net_proto_text
[ 87%] Built target finetune_net
[ 89%] Built target caffe.bin
[ 90%] Built target upgrade_solver_proto_text
[ 90%] Built target test_net
[ 91%] Built target net_speed_benchmark
[ 93%] Built target upgrade_net_proto_binary
[ 94%] Built target convert_imageset
[ 95%] Built target train_net
[ 95%] Built target convert_mnist_data
[ 97%] Built target convert_mnist_siamese_data
[ 97%] Built target classification
[ 98%] Built target convert_cifar_data
[100%] Built target pycaffe
[100%] Building Matlab interface: /sw/caffe/caffe-master/matlab/+caffe/private/caffe_.mex
Building with 'g++'.
MEX completed successfully.
[100%] Built target matlab
Install the project...
-- Install configuration: "Release"
-- Installing: /sw/caffe/caffe/share/Caffe/CaffeConfig.cmake
-- Installing: /sw/caffe/caffe/share/Caffe/CaffeTargets.cmake
-- Installing: /sw/caffe/caffe/share/Caffe/CaffeTargets-release.cmake
-- Installing: /sw/caffe/caffe/include/caffe
-- Installing: /sw/caffe/caffe/include/caffe/blob.hpp
-- Installing: /sw/caffe/caffe/include/caffe/caffe.hpp
-- Installing: /sw/caffe/caffe/include/caffe/common.hpp
-- Installing: /sw/caffe/caffe/include/caffe/data_reader.hpp
-- Installing: /sw/caffe/caffe/include/caffe/data_transformer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/filler.hpp
-- Installing: /sw/caffe/caffe/include/caffe/internal_thread.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layer_factory.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers
-- Installing: /sw/caffe/caffe/include/caffe/layers/absval_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/accuracy_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/argmax_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/base_conv_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/base_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/batch_norm_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/batch_reindex_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/bias_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/bnll_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/concat_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/contrastive_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/conv_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/crop_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_conv_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_lcn_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_lrn_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_pooling_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_relu_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_sigmoid_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_softmax_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/cudnn_tanh_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/deconv_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/dropout_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/dummy_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/eltwise_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/elu_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/embed_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/euclidean_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/exp_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/filter_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/flatten_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/hdf5_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/hdf5_output_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/hinge_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/im2col_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/image_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/infogain_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/inner_product_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/input_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/log_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/lrn_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/memory_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/multinomial_logistic_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/mvn_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/neuron_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/pooling_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/power_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/prelu_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/python_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/reduction_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/relu_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/reshape_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/scale_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/sigmoid_cross_entropy_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/sigmoid_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/silence_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/slice_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/softmax_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/softmax_loss_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/split_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/spp_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/tanh_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/threshold_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/tile_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/layers/window_data_layer.hpp
-- Installing: /sw/caffe/caffe/include/caffe/net.hpp
-- Installing: /sw/caffe/caffe/include/caffe/parallel.hpp
-- Installing: /sw/caffe/caffe/include/caffe/sgd_solvers.hpp
-- Installing: /sw/caffe/caffe/include/caffe/solver.hpp
-- Installing: /sw/caffe/caffe/include/caffe/solver_factory.hpp
-- Installing: /sw/caffe/caffe/include/caffe/syncedmem.hpp
-- Installing: /sw/caffe/caffe/include/caffe/test
-- Installing: /sw/caffe/caffe/include/caffe/test/test_caffe_main.hpp
-- Installing: /sw/caffe/caffe/include/caffe/test/test_gradient_check_util.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util
-- Installing: /sw/caffe/caffe/include/caffe/util/benchmark.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/blocking_queue.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/cudnn.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/db.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/db_leveldb.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/db_lmdb.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/device_alternate.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/format.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/gpu_util.cuh
-- Installing: /sw/caffe/caffe/include/caffe/util/hdf5.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/im2col.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/insert_splits.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/io.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/math_functions.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/mkl_alternate.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/rng.hpp
-- Installing: /sw/caffe/caffe/include/caffe/util/signal_handler.h
-- Installing: /sw/caffe/caffe/include/caffe/util/upgrade_proto.hpp
-- Installing: /sw/caffe/caffe/include/caffe/proto/caffe.pb.h
-- Installing: /sw/caffe/caffe/lib/libcaffe.so.1.0.0-rc3
-- Installing: /sw/caffe/caffe/lib/libcaffe.so
-- Set runtime path of "/sw/caffe/caffe/lib/libcaffe.so.1.0.0-rc3" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/lib/libproto.a
-- Installing: /sw/caffe/caffe/python/caffe/proto/caffe_pb2.py
-- Installing: /sw/caffe/caffe/python/caffe/proto/__init__.py
-- Installing: /sw/caffe/caffe/bin/caffe
-- Set runtime path of "/sw/caffe/caffe/bin/caffe" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/compute_image_mean
-- Set runtime path of "/sw/caffe/caffe/bin/compute_image_mean" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/convert_imageset
-- Set runtime path of "/sw/caffe/caffe/bin/convert_imageset" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/device_query
-- Set runtime path of "/sw/caffe/caffe/bin/device_query" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/extract_features
-- Set runtime path of "/sw/caffe/caffe/bin/extract_features" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/finetune_net
-- Set runtime path of "/sw/caffe/caffe/bin/finetune_net" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/net_speed_benchmark
-- Set runtime path of "/sw/caffe/caffe/bin/net_speed_benchmark" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/test_net
-- Set runtime path of "/sw/caffe/caffe/bin/test_net" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/train_net
-- Set runtime path of "/sw/caffe/caffe/bin/train_net" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/upgrade_net_proto_binary
-- Set runtime path of "/sw/caffe/caffe/bin/upgrade_net_proto_binary" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/upgrade_net_proto_text
-- Set runtime path of "/sw/caffe/caffe/bin/upgrade_net_proto_text" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/upgrade_solver_proto_text
-- Set runtime path of "/sw/caffe/caffe/bin/upgrade_solver_proto_text" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/convert_cifar_data
-- Set runtime path of "/sw/caffe/caffe/bin/convert_cifar_data" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/classification
-- Set runtime path of "/sw/caffe/caffe/bin/classification" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/convert_mnist_data
-- Set runtime path of "/sw/caffe/caffe/bin/convert_mnist_data" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/bin/convert_mnist_siamese_data
-- Set runtime path of "/sw/caffe/caffe/bin/convert_mnist_siamese_data" to "/sw/caffe/caffe/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib:/sw/python/2.7.1-shared/lib"
-- Installing: /sw/caffe/caffe/python/classify.py
-- Installing: /sw/caffe/caffe/python/detect.py
-- Installing: /sw/caffe/caffe/python/draw_net.py
-- Installing: /sw/caffe/caffe/python/requirements.txt
-- Installing: /sw/caffe/caffe/python/caffe/__init__.py
-- Installing: /sw/caffe/caffe/python/caffe/classifier.py
-- Installing: /sw/caffe/caffe/python/caffe/coord_map.py
-- Installing: /sw/caffe/caffe/python/caffe/detector.py
-- Installing: /sw/caffe/caffe/python/caffe/draw.py
-- Installing: /sw/caffe/caffe/python/caffe/io.py
-- Installing: /sw/caffe/caffe/python/caffe/net_spec.py
-- Installing: /sw/caffe/caffe/python/caffe/pycaffe.py
-- Installing: /sw/caffe/caffe/python/caffe/_caffe.so
-- Set runtime path of "/sw/caffe/caffe/python/caffe/_caffe.so" to "/sw/caffe/caffe/lib:/sw/python/2.7.1-shared/lib:/sw/library/boost/1.60.0/ser/lib:/sw/library/hdf5/1.8.7/lib:/usr/local/cuda/lib64:/sw/cuda/cuda_7.5.18/lib64:/sw/library/lapack/lapack-3.6.0/3.6.0/lib64:/sw/library/atlas/3.10.2/lib"
-- Installing: /sw/caffe/caffe/python/caffe/imagenet
-- Installing: /sw/caffe/caffe/python/caffe/imagenet/ilsvrc_2012_mean.npy
-- Up-to-date: /sw/caffe/caffe/python/caffe/proto
-- Installing: /sw/caffe/caffe/python/caffe/proto/__init__.py
-- Installing: /sw/caffe/caffe/python/caffe/proto/caffe_pb2.py
-- Installing: /sw/caffe/caffe/python/caffe/test
-- Installing: /sw/caffe/caffe/python/caffe/test/test_coord_map.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_io.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_layer_type_list.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_net.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_net_spec.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_python_layer.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_python_layer_with_param_str.py
-- Installing: /sw/caffe/caffe/python/caffe/test/test_solver.py
CMake Error at matlab/cmake_install.cmake:36 (file):
  file INSTALL cannot find
  "/sw/caffe/caffe-master/matlab/+caffe/private/caffe_.mex".
Call Stack (most recent call first):
  cmake_install.cmake:65 (include)



make: *** [install] Error 1

 

 

Reference

  1. https://github.com/BVLC/caffe
  2. http://caffe.berkeleyvision.org/
  3. https://github.com/casadi/casadi/blob/master/cmake/FindMATLAB.cmake

...