module load pymol/pymol

Pr-requisite
===========
python python-dev python-pmw python-numpy freeglut3-dev libglew-dev libpng12-dev libfreetype6-dev build-essential libxml++2.6-dev

module load python/2.7.1
module load bioinformatics/numpy/1.6.1
module load library/glew/1.13.0
module load library/freetype/2.5.2



  1. Install python-pmw
------------------
tar -zxvf Pmw-2.0.0.tar.gz
cd /sw/bioinformatics/PyMOL/src/Pmw-2.0.0
python setup.py build install

2. freeglut3
>>>>>>
rpm -qa|grep freeglut
freeglut-2.6.0-1.el6.x86_64
freeglut-devel-2.6.0-1.el6.x86_64
>>>>>>>
3. libpng
>>>>>>>
rpm -qa|grep libpng
libpng-1.2.49-1.el6_2.x86_64
libpng-devel-1.2.49-1.el6_2.x86_64
>>>>>>
4. libxml++
>>>>>>>>>>>>>
rpm -qa|grep libxml
libxml2-python-2.7.6-17.el6_6.1.x86_64
perl-libxml-perl-0.08-10.el6.noarch
libxml2-devel-2.7.6-17.el6_6.1.x86_64
libxml2-2.7.6-17.el6_6.1.x86_64
>>>>>>>>>>>>


wget http://sourceforge.net/projects/pymol/files/latest/download -O pymol_source.tar.bz2
tar -xvf pymol_source.tar.bz2
cd pymol
mkdir -p /sw/bioinformatics/PyMOL
prefix=/sw/bioinformatics/PyMOL
modules=$prefix/modules
python setup.py build install --home=$prefix --install-lib=$modules --install-scripts=$prefix