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TensorFlow
TensorFlow
Introduction
TensorFlow is an open source software library for numerical computation using data flow graphs. Nodes in the graph represent mathematical operations, while the graph edges represent the multidimensional data arrays (tensors) that flow between them. This flexible architecture lets you deploy computation to one or more CPUs or GPUs in a desktop, server, or mobile device without rewriting code. TensorFlow also includes TensorBoard, a data visualization toolkit.
Usage
module load anaconda/4.00py3.5 OR module load anaconda/4.00py2.7
Installation
module load anaconda/4.00py3.5 conda install tensorflow python Python 3.5.4 |Anaconda custom (64-bit)| (default, Aug 14 2017, 13:26:58) [GCC 4.4.7 20120313 (Red Hat 4.4.7-1)] on linux Type "help", "copyright", "credits" or "license" for more information. >>> import tensorflow as tf >>>
Anaconda with Python 2.7
module load anaconda/4.00py2.7 [root@gowonda2 ~]# conda install tensorflow Fetching package metadata ......... Solving package specifications: . Package plan for installation in environment /sw/anaconda/py27-ver400: The following NEW packages will be INSTALLED: backports: 1.0-py27_0 backports.weakref: 1.0rc1-py27_0 bleach: 1.5.0-py27_0 html5lib: 0.9999999-py27_0 libprotobuf: 3.4.0-0 markdown: 2.6.9-py27_0 mock: 2.0.0-py27_0 pbr: 1.10.0-py27_0 protobuf: 3.4.0-py27_0 tensorflow: 1.3.0-0 tensorflow-base: 1.3.0-py27_0 tensorflow-tensorboard: 0.1.5-py27_0 The following packages will be UPDATED: conda: 4.3.16-py27_0 --> 4.3.30-py27h6ae6dc7_0 funcsigs: 0.4-py27_0 --> 1.0.2-py27_0 werkzeug: 0.11.4-py27_0 --> 0.12.2-py27_0 Proceed ([y]/n)?
Sample pbs script that will work with n060
https://github.com/jcjohnson/pytorch-examples/blob/master/tensor/two_layer_net_tensor.py two_layer_net_tensor.py
#!/bin/sh #PBS -m abe #PBS -M youremail@griffith.edu.au #PBS -N myTestRun #PBS -q dljun #PBS -l walltime=01:00:00 #PBS -l select=1:ncpus=1:ngpus=1:mem=16g,walltime=1:00:00 source $HOME/.bashrc cd $PBS_O_WORKDIR module load cuda/10.0 module load anaconda/5.3.1py3 #source activate tensorflow_gpuenv source activate tensorflow-gpu #module list ###source of the sample: https://github.com/jcjohnson/pytorch-examples/blob/master/tensor/two_layer_net_tensor.py python sample/two_layer_net_tensor.py > output_${PBS_JOBID}.log echo "Done with job"