Introduction

Bowtie is an ultrafast memory-efficient short read aligner

Usage

module load bioinformatics/bowtie/2-2.0.2

Installation

cd /sw/bioinformatics/bowtie/2-2.0.2/src
unzip bowtie2-2.0.2-linux-x86_64.zip
cd /sw/bioinformatics/bowtie/2-2.0.2/src/bowtie2-2.0.2
mv * /sw/bioinformatics/bowtie/2-2.0.2

Reference

1. http://bowtie-bio.sourceforge.net/index.shtml
2. http://sourceforge.net/projects/bowtie-bio/files/bowtie2/2.0.2/