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RAxML

RAxML

Owned by Indy Siva

Last updated: Oct 18, 2017

Introduction

RAxML (Randomized Axelerated Maximum Likelihood)

Usage

module load bioinformatics/raxml/8.2.11

The binaries are located at: /sw/bioinformatics/raxml/8.2.11/bin
raxmlHPC  raxmlHPC-MPI-SSE3  raxmlHPC-PTHREADS  raxmlHPC-SSE3

Installation

cd /sw/bioinformatics/raxml/8.2.11/src/standard-RAxML-8.2.11
module load mpi/openMPI/1.8.5-gcc4.9.0
module load gcc/6.3.0

make -f Makefile.gcc
make -f Makefile.SSE3.MPI.gcc
make -f  Makefile.PTHREADS.gcc
make -f Makefile.SSE3.gcc

cp raxmlHPC* ../../bin

Reference