prodigal
Introduction
Prodigal is fast, reliable protein-coding gene prediction for prokaryotic genomes.
Usage
module load bioinformatics/prodigal/2.6.2
Â
Installation
cd /sw/bioinformatics/prodigal/2.6.2 git clone https://github.com/hyattpd/Prodigal.git cd /sw/bioinformatics/prodigal/2.6.2/Prodigal make >>>>>> cc -pedantic -Wall -O3 -c -o bitmap.o bitmap.c gcc -pedantic -Wall -O3 -c -o dprog.o dprog.c gcc -pedantic -Wall -O3 -c -o gene.o gene.c gcc -pedantic -Wall -O3 -c -o main.o main.c gcc -pedantic -Wall -O3 -c -o metagenomic.o metagenomic.c gcc -pedantic -Wall -O3 -c -o node.o node.c gcc -pedantic -Wall -O3 -c -o sequence.o sequence.c gcc -pedantic -Wall -O3 -c -o training.o training.c gcc -pedantic -Wall -O3 -o prodigal bitmap.o dprog.o gene.o main.o metagenomic.o node.o sequence.o training.o -lm >>>>>>
Â
Reference
Â